docs(trekresearch): document --engine in command-modes, CLAUDE, README
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@ -26,6 +26,7 @@ Always interactive. Phase 3 is a section-driven completeness loop (no hard cap o
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| `--gates {true\|false}` | (v3.4.0) Boolean autonomy-gate flag; present → gating on. Policy (`gates_mode`) detailed under `## Autonomy mode` in `docs/operations.md`. |
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| `--min-brief-version <ver>` | (S18) Warn — never block — if an attached `--project` brief declares a version below `<ver>` (e.g. `2.2`), i.e. sidesteps framing enforcement |
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| `--profile <name>` | (v4.1.0) Model profile for the research phase. |
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| `--engine {swarm\|deep-research}` | (deep-research-engine) Opt-in external-research engine; `deep-research` delegates the external phase to Claude Code's built-in `/deep-research` workflow (CC 2.1.154+), falls back to `swarm`. Default `swarm`. |
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Flags combine: `--project <dir> --local`, `--external --quick`.
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